Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN2P51788 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN2P51788 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.85■□□□□ 0.29
CLCN2P51788 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.85■□□□□ 0.29
CLCN2P51788 AC124864.1-201ENST00000623408 392 ntBASIC16.85■□□□□ 0.29
CLCN2P51788 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.85■□□□□ 0.29
CLCN2P51788 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CLCN2P51788 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.85■□□□□ 0.29
CLCN2P51788 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CLCN2P51788 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
CLCN2P51788 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CLCN2P51788 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CLCN2P51788 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 TSPY12P-201ENST00000421279 868 ntBASIC16.84■□□□□ 0.29
CLCN2P51788 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN2P51788 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.84■□□□□ 0.29
CLCN2P51788 MIR3180-1-201ENST00000580374 94 ntBASIC16.84■□□□□ 0.29
CLCN2P51788 MIR3180-3-201ENST00000584616 94 ntBASIC16.84■□□□□ 0.29
CLCN2P51788 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.84■□□□□ 0.29
CLCN2P51788 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN2P51788 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CLCN2P51788 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN2P51788 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CLCN2P51788 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CLCN2P51788 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.84■□□□□ 0.29
CLCN2P51788 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.84■□□□□ 0.29
CLCN2P51788 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN2P51788 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN2P51788 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN2P51788 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN2P51788 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CLCN2P51788 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.83■□□□□ 0.29
CLCN2P51788 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
CLCN2P51788 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLCN2P51788 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLCN2P51788 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CLCN2P51788 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CLCN2P51788 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CLCN2P51788 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.83■□□□□ 0.28
CLCN2P51788 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.83■□□□□ 0.28
CLCN2P51788 AL592071.1-201ENST00000611956 408 ntBASIC16.83■□□□□ 0.28
CLCN2P51788 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CLCN2P51788 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CLCN2P51788 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms