Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 RNA5SP416-201ENST00000516838 111 ntBASIC19.15■□□□□ 0.66
GPC3P51654 IGHV3-65-201ENST00000523210 341 ntBASIC19.15■□□□□ 0.66
GPC3P51654 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.15■□□□□ 0.66
GPC3P51654 AC139530.3-201ENST00000620344 690 ntBASIC19.15■□□□□ 0.66
GPC3P51654 LINC01451-201ENST00000623792 534 ntBASIC19.15■□□□□ 0.66
GPC3P51654 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.15■□□□□ 0.66
GPC3P51654 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GPC3P51654 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GPC3P51654 AC026471.1-201ENST00000564629 3026 ntBASIC19.14■□□□□ 0.66
GPC3P51654 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GPC3P51654 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GPC3P51654 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
GPC3P51654 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC3P51654 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 AC108073.2-201ENST00000464002 357 ntBASIC19.14■□□□□ 0.65
GPC3P51654 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC3P51654 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.14■□□□□ 0.65
GPC3P51654 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.14■□□□□ 0.65
GPC3P51654 AC008667.4-201ENST00000607370 168 ntBASIC19.14■□□□□ 0.65
GPC3P51654 AC064836.3-201ENST00000607928 673 ntBASIC19.14■□□□□ 0.65
GPC3P51654 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
GPC3P51654 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.14■□□□□ 0.65
GPC3P51654 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 GPR89P-201ENST00000407924 1495 ntBASIC19.14■□□□□ 0.65
GPC3P51654 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC3P51654 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GPC3P51654 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GPC3P51654 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.14■□□□□ 0.65
GPC3P51654 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
GPC3P51654 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.13■□□□□ 0.65
GPC3P51654 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.13■□□□□ 0.65
GPC3P51654 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.13■□□□□ 0.65
GPC3P51654 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC3P51654 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC3P51654 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.13■□□□□ 0.65
GPC3P51654 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
GPC3P51654 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.13■□□□□ 0.65
GPC3P51654 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC3P51654 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.13■□□□□ 0.65
GPC3P51654 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.13■□□□□ 0.65
GPC3P51654 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GPC3P51654 AL805961.1-202ENST00000641562 540 ntBASIC19.13■□□□□ 0.65
GPC3P51654 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.13■□□□□ 0.65
GPC3P51654 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.13■□□□□ 0.65
GPC3P51654 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
GPC3P51654 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GPC3P51654 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC3P51654 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC3P51654 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.12■□□□□ 0.65
GPC3P51654 AC040169.1-201ENST00000565382 521 ntBASIC19.12■□□□□ 0.65
GPC3P51654 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GPC3P51654 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC3P51654 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.12■□□□□ 0.65
GPC3P51654 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.12■□□□□ 0.65
GPC3P51654 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.12■□□□□ 0.65
GPC3P51654 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.12■□□□□ 0.65
GPC3P51654 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms