Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC34P49427 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDC34P49427 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDC34P49427 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.76□□□□□ -0.21
CDC34P49427 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDC34P49427 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.76□□□□□ -0.21
CDC34P49427 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
CDC34P49427 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 AL513523.2-202ENST00000427283 2040 ntBASIC13.75□□□□□ -0.21
CDC34P49427 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC34P49427 AC092068.3-201ENST00000587894 2016 ntBASIC13.75□□□□□ -0.21
CDC34P49427 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC13.75□□□□□ -0.21
CDC34P49427 AC097488.1-201ENST00000507834 756 ntBASIC13.75□□□□□ -0.21
CDC34P49427 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC34P49427 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC34P49427 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.75□□□□□ -0.21
CDC34P49427 RN7SL471P-201ENST00000580476 299 ntBASIC13.75□□□□□ -0.21
CDC34P49427 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CDC34P49427 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC34P49427 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.75□□□□□ -0.21
CDC34P49427 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.75□□□□□ -0.21
CDC34P49427 AL365209.1-201ENST00000624418 6473 ntBASIC13.75□□□□□ -0.21
CDC34P49427 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDC34P49427 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDC34P49427 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 BX276092.7-203ENST00000637198 1536 ntBASIC13.74□□□□□ -0.21
CDC34P49427 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 AC078925.2-201ENST00000624013 1973 ntBASIC13.74□□□□□ -0.21
CDC34P49427 RNF216P1-203ENST00000404404 2427 ntBASIC13.74□□□□□ -0.21
CDC34P49427 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
CDC34P49427 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
CDC34P49427 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.74□□□□□ -0.21
CDC34P49427 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.74□□□□□ -0.21
CDC34P49427 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.74□□□□□ -0.21
CDC34P49427 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.74□□□□□ -0.21
CDC34P49427 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CDC34P49427 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms