Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SOX2P48431 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SOX2P48431 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX2P48431 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 AC005104.2-201ENST00000427818 678 ntBASIC15.32■□□□□ 0.04
SOX2P48431 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX2P48431 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX2P48431 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.32■□□□□ 0.04
SOX2P48431 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.32■□□□□ 0.04
SOX2P48431 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SOX2P48431 AL136038.4-201ENST00000603606 1261 ntBASIC15.32■□□□□ 0.04
SOX2P48431 AL139327.4-201ENST00000612362 153 ntBASIC15.32■□□□□ 0.04
SOX2P48431 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX2P48431 AC079602.3-201ENST00000623931 403 ntBASIC15.32■□□□□ 0.04
SOX2P48431 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX2P48431 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX2P48431 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
SOX2P48431 AL391807.1-203ENST00000604392 2365 ntBASIC15.32■□□□□ 0.04
SOX2P48431 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SOX2P48431 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.32■□□□□ 0.04
SOX2P48431 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SOX2P48431 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.32■□□□□ 0.04
SOX2P48431 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 KRT18P48-201ENST00000434763 852 ntBASIC15.31■□□□□ 0.04
SOX2P48431 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.31■□□□□ 0.04
SOX2P48431 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.31■□□□□ 0.04
SOX2P48431 AL023973.1-201ENST00000624619 620 ntBASIC15.31■□□□□ 0.04
SOX2P48431 AC141257.4-201ENST00000634557 245 ntBASIC15.31■□□□□ 0.04
SOX2P48431 AC136944.6-201ENST00000634818 245 ntBASIC15.31■□□□□ 0.04
SOX2P48431 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SOX2P48431 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SOX2P48431 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SOX2P48431 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
SOX2P48431 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.3■□□□□ 0.04
SOX2P48431 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SOX2P48431 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SOX2P48431 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.3■□□□□ 0.04
SOX2P48431 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SOX2P48431 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SOX2P48431 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms