Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 AC067852.2-201ENST00000590513 2313 ntBASIC16.4■□□□□ 0.22
GABRA4P48169 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
GABRA4P48169 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
GABRA4P48169 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 RNA5SP416-201ENST00000516838 111 ntBASIC16.4■□□□□ 0.22
GABRA4P48169 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.4■□□□□ 0.22
GABRA4P48169 MIR4751-201ENST00000578027 74 ntBASIC16.4■□□□□ 0.22
GABRA4P48169 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 AC010654.1-201ENST00000615722 808 ntBASIC16.4■□□□□ 0.22
GABRA4P48169 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.4■□□□□ 0.22
GABRA4P48169 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
GABRA4P48169 PI4KAP1-204ENST00000612579 1703 ntBASIC16.39■□□□□ 0.21
GABRA4P48169 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.39■□□□□ 0.21
GABRA4P48169 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.39■□□□□ 0.21
GABRA4P48169 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GABRA4P48169 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GABRA4P48169 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.39■□□□□ 0.21
GABRA4P48169 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
GABRA4P48169 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
GABRA4P48169 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.39■□□□□ 0.21
GABRA4P48169 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 AC016396.2-201ENST00000562575 1417 ntBASIC16.38■□□□□ 0.21
GABRA4P48169 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.38■□□□□ 0.21
GABRA4P48169 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 AC040169.1-201ENST00000565382 521 ntBASIC16.38■□□□□ 0.21
GABRA4P48169 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 AC090340.1-201ENST00000620778 4980 ntBASIC16.38■□□□□ 0.21
GABRA4P48169 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.38■□□□□ 0.21
GABRA4P48169 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
GABRA4P48169 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
GABRA4P48169 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
GABRA4P48169 AL133373.2-201ENST00000623187 2828 ntBASIC16.37■□□□□ 0.21
GABRA4P48169 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.37■□□□□ 0.21
GABRA4P48169 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABRA4P48169 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABRA4P48169 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
GABRA4P48169 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
GABRA4P48169 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
GABRA4P48169 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
GABRA4P48169 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.37■□□□□ 0.21
GABRA4P48169 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.37■□□□□ 0.21
GABRA4P48169 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.37■□□□□ 0.21
GABRA4P48169 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.37■□□□□ 0.21
GABRA4P48169 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.37■□□□□ 0.21
GABRA4P48169 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms