Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.51■□□□□ 0.39
CHRNA4P43681 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNA4P43681 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA4P43681 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.51■□□□□ 0.39
CHRNA4P43681 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA4P43681 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA4P43681 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CHRNA4P43681 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA4P43681 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
CHRNA4P43681 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 AKR1C7P-201ENST00000305623 895 ntBASIC17.5■□□□□ 0.39
CHRNA4P43681 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA4P43681 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 AL020989.1-201ENST00000422979 469 ntBASIC17.5■□□□□ 0.39
CHRNA4P43681 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHRNA4P43681 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA4P43681 UNC93B7-201ENST00000509439 705 ntBASIC17.5■□□□□ 0.39
CHRNA4P43681 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA4P43681 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CHRNA4P43681 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CHRNA4P43681 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA4P43681 AC060834.1-201ENST00000443027 2032 ntBASIC17.5■□□□□ 0.39
CHRNA4P43681 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA4P43681 AC079776.2-201ENST00000641154 1609 ntBASIC17.5■□□□□ 0.39
CHRNA4P43681 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA4P43681 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CHRNA4P43681 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA4P43681 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 AC092053.1-201ENST00000605787 1936 ntBASIC17.49■□□□□ 0.39
CHRNA4P43681 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA4P43681 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA4P43681 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA4P43681 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA4P43681 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA4P43681 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA4P43681 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 BX005266.1-201ENST00000473402 457 ntBASIC17.49■□□□□ 0.39
CHRNA4P43681 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 AC106795.1-205ENST00000512851 1056 ntBASIC17.49■□□□□ 0.39
CHRNA4P43681 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA4P43681 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA4P43681 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA4P43681 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms