Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.26■□□□□ 0.67
HTTP42858 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
HTTP42858 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
HTTP42858 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HTTP42858 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.26■□□□□ 0.67
HTTP42858 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.26■□□□□ 0.67
HTTP42858 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.26■□□□□ 0.67
HTTP42858 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 REXO1L9P-201ENST00000604264 2108 ntBASIC19.26■□□□□ 0.67
HTTP42858 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HTTP42858 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.25■□□□□ 0.67
HTTP42858 CROCCP3-202ENST00000420820 1947 ntBASIC19.25■□□□□ 0.67
HTTP42858 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 PARP8-206ENST00000503665 572 ntTSL 4 BASIC19.25■□□□□ 0.67
HTTP42858 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.25■□□□□ 0.67
HTTP42858 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.25■□□□□ 0.67
HTTP42858 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HTTP42858 AC008738.7-201ENST00000609744 511 ntBASIC19.25■□□□□ 0.67
HTTP42858 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
HTTP42858 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.25■□□□□ 0.67
HTTP42858 AC007541.1-201ENST00000570282 1469 ntBASIC19.25■□□□□ 0.67
HTTP42858 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.25■□□□□ 0.67
HTTP42858 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.25■□□□□ 0.67
HTTP42858 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.25■□□□□ 0.67
HTTP42858 AL161645.1-201ENST00000622716 1255 ntBASIC19.25■□□□□ 0.67
HTTP42858 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HTTP42858 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HTTP42858 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HTTP42858 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HTTP42858 MIR4259-201ENST00000584466 101 ntBASIC19.25■□□□□ 0.67
HTTP42858 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.24■□□□□ 0.67
HTTP42858 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.24■□□□□ 0.67
HTTP42858 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 REXO1L6P-201ENST00000603433 1515 ntBASIC19.24■□□□□ 0.67
HTTP42858 BX276092.7-203ENST00000637198 1536 ntBASIC19.24■□□□□ 0.67
HTTP42858 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 MXI1-205ENST00000393134 889 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 COX11-210ENST00000639671 696 ntBASIC19.24■□□□□ 0.67
HTTP42858 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HTTP42858 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.24■□□□□ 0.67
HTTP42858 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.24■□□□□ 0.67
HTTP42858 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HTTP42858 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTTP42858 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HTTP42858 BCYRN1-201ENST00000418539 200 ntBASIC19.23■□□□□ 0.67
HTTP42858 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.23■□□□□ 0.67
HTTP42858 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 AC092658.1-201ENST00000505836 891 ntBASIC19.23■□□□□ 0.67
HTTP42858 IGHV3OR16-16-201ENST00000563644 343 ntBASIC19.23■□□□□ 0.67
HTTP42858 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HTTP42858 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HTTP42858 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HTTP42858 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.23■□□□□ 0.67
HTTP42858 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.23■□□□□ 0.67
HTTP42858 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms