Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPHP41219 REXO1L6P-202ENST00000619970 1078 ntBASIC19.6■□□□□ 0.73
PRPHP41219 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPHP41219 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPHP41219 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRPHP41219 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PRPHP41219 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PRPHP41219 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PRPHP41219 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.6■□□□□ 0.73
PRPHP41219 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PRPHP41219 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPHP41219 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPHP41219 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 EGFEM1P-202ENST00000431685 1563 ntBASIC19.59■□□□□ 0.73
PRPHP41219 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.59■□□□□ 0.73
PRPHP41219 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRPHP41219 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.59■□□□□ 0.73
PRPHP41219 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 KRT18P56-201ENST00000507275 550 ntBASIC19.59■□□□□ 0.73
PRPHP41219 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.59■□□□□ 0.73
PRPHP41219 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 AL355877.3-201ENST00000622820 899 ntBASIC19.59■□□□□ 0.73
PRPHP41219 AL139288.1-201ENST00000623748 933 ntBASIC19.59■□□□□ 0.73
PRPHP41219 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PRPHP41219 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PRPHP41219 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PRPHP41219 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPHP41219 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPHP41219 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPHP41219 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PRPHP41219 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPHP41219 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PRPHP41219 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.58■□□□□ 0.72
PRPHP41219 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPHP41219 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.58■□□□□ 0.72
PRPHP41219 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.58■□□□□ 0.72
PRPHP41219 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.58■□□□□ 0.72
PRPHP41219 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PRPHP41219 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRPHP41219 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
PRPHP41219 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 AC004817.3-201ENST00000602957 2129 ntBASIC19.57■□□□□ 0.72
PRPHP41219 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.57■□□□□ 0.72
PRPHP41219 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRPHP41219 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.57■□□□□ 0.72
PRPHP41219 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PRPHP41219 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRPHP41219 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms