Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 AC006504.4-201ENST00000592118 1568 ntBASIC15.91■□□□□ 0.14
RFC3P40938 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RFC3P40938 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 KRT18P55-202ENST00000578578 1546 ntBASIC15.9■□□□□ 0.14
RFC3P40938 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 BICD1-207ENST00000551848 1962 ntBASIC15.9■□□□□ 0.14
RFC3P40938 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.9■□□□□ 0.14
RFC3P40938 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RFC3P40938 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.9■□□□□ 0.14
RFC3P40938 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.9■□□□□ 0.14
RFC3P40938 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.9■□□□□ 0.14
RFC3P40938 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
RFC3P40938 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.9■□□□□ 0.14
RFC3P40938 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.9■□□□□ 0.14
RFC3P40938 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.9■□□□□ 0.14
RFC3P40938 AC005593.1-201ENST00000624894 515 ntBASIC15.9■□□□□ 0.14
RFC3P40938 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RFC3P40938 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
RFC3P40938 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RFC3P40938 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 AC073621.1-201ENST00000392730 636 ntBASIC15.89■□□□□ 0.13
RFC3P40938 BX842568.4-201ENST00000421222 227 ntBASIC15.89■□□□□ 0.13
RFC3P40938 KRT18P27-201ENST00000427733 1299 ntBASIC15.89■□□□□ 0.13
RFC3P40938 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 AC009947.1-201ENST00000444350 727 ntBASIC15.89■□□□□ 0.13
RFC3P40938 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 PRYP5-201ENST00000451909 266 ntBASIC15.89■□□□□ 0.13
RFC3P40938 SIGLEC30P-201ENST00000455569 941 ntBASIC15.89■□□□□ 0.13
RFC3P40938 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.89■□□□□ 0.13
RFC3P40938 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.89■□□□□ 0.13
RFC3P40938 AC136632.2-201ENST00000512891 861 ntBASIC15.89■□□□□ 0.13
RFC3P40938 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.89■□□□□ 0.13
RFC3P40938 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 STK25P1-201ENST00000585406 838 ntBASIC15.89■□□□□ 0.13
RFC3P40938 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RFC3P40938 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.89■□□□□ 0.13
RFC3P40938 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RFC3P40938 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RFC3P40938 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms