Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.16■□□□□ 0.18
GABRA3P34903 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GABRA3P34903 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.16■□□□□ 0.18
GABRA3P34903 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.16■□□□□ 0.18
GABRA3P34903 ABCD1P5-201ENST00000445663 754 ntBASIC16.16■□□□□ 0.18
GABRA3P34903 AC132008.2-207ENST00000454517 770 ntBASIC16.16■□□□□ 0.18
GABRA3P34903 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.16■□□□□ 0.18
GABRA3P34903 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 AP000867.4-201ENST00000641616 219 ntBASIC16.16■□□□□ 0.18
GABRA3P34903 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GABRA3P34903 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
GABRA3P34903 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GABRA3P34903 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.16■□□□□ 0.18
GABRA3P34903 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.16■□□□□ 0.18
GABRA3P34903 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
GABRA3P34903 AP001094.4-201ENST00000579008 2176 ntBASIC16.16■□□□□ 0.18
GABRA3P34903 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
GABRA3P34903 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
GABRA3P34903 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.15■□□□□ 0.18
GABRA3P34903 PRELID1P1-202ENST00000567272 903 ntBASIC16.15■□□□□ 0.18
GABRA3P34903 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 AL121772.3-201ENST00000610840 674 ntBASIC16.15■□□□□ 0.18
GABRA3P34903 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
GABRA3P34903 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
GABRA3P34903 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
GABRA3P34903 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
GABRA3P34903 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.14■□□□□ 0.18
GABRA3P34903 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.14■□□□□ 0.18
GABRA3P34903 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.14■□□□□ 0.17
GABRA3P34903 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.14■□□□□ 0.17
GABRA3P34903 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GABRA3P34903 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.14■□□□□ 0.17
GABRA3P34903 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.14■□□□□ 0.17
GABRA3P34903 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.14■□□□□ 0.17
GABRA3P34903 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.14■□□□□ 0.17
GABRA3P34903 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.14■□□□□ 0.17
GABRA3P34903 AL732292.2-201ENST00000609649 430 ntBASIC16.14■□□□□ 0.17
GABRA3P34903 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GABRA3P34903 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 AC116353.5-201ENST00000638148 1699 ntBASIC16.14■□□□□ 0.17
GABRA3P34903 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GABRA3P34903 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GABRA3P34903 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GABRA3P34903 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GABRA3P34903 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABRA3P34903 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GABRA3P34903 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
GABRA3P34903 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms