Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GDF1P27539 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 AC006504.4-201ENST00000592118 1568 ntBASIC15.75■□□□□ 0.11
GDF1P27539 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
GDF1P27539 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
GDF1P27539 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 MIR574-201ENST00000385209 96 ntBASIC15.75■□□□□ 0.11
GDF1P27539 AC073621.1-201ENST00000392730 636 ntBASIC15.75■□□□□ 0.11
GDF1P27539 LINC00982-205ENST00000420957 435 ntBASIC15.75■□□□□ 0.11
GDF1P27539 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.75■□□□□ 0.11
GDF1P27539 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.75■□□□□ 0.11
GDF1P27539 UNC93B6-202ENST00000528242 690 ntBASIC15.75■□□□□ 0.11
GDF1P27539 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.75■□□□□ 0.11
GDF1P27539 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.75■□□□□ 0.11
GDF1P27539 AC145285.3-201ENST00000564603 959 ntBASIC15.75■□□□□ 0.11
GDF1P27539 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.75■□□□□ 0.11
GDF1P27539 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GDF1P27539 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.75■□□□□ 0.11
GDF1P27539 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
GDF1P27539 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.74■□□□□ 0.11
GDF1P27539 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.74■□□□□ 0.11
GDF1P27539 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.74■□□□□ 0.11
GDF1P27539 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.74■□□□□ 0.11
GDF1P27539 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GDF1P27539 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 AC133963.1-201ENST00000504166 1679 ntBASIC15.73■□□□□ 0.11
GDF1P27539 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.73■□□□□ 0.11
GDF1P27539 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 TERC-201ENST00000602385 541 ntBASIC15.73■□□□□ 0.11
GDF1P27539 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.73■□□□□ 0.11
GDF1P27539 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.73■□□□□ 0.11
GDF1P27539 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
GDF1P27539 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GDF1P27539 AL135999.2-201ENST00000622438 1686 ntBASIC15.73■□□□□ 0.11
GDF1P27539 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GDF1P27539 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GDF1P27539 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms