Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.89■□□□□ 0.45
BRAFP15056 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.89■□□□□ 0.45
BRAFP15056 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRAFP15056 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRAFP15056 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRAFP15056 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BRAFP15056 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.88■□□□□ 0.45
BRAFP15056 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.88■□□□□ 0.45
BRAFP15056 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.88■□□□□ 0.45
BRAFP15056 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.88■□□□□ 0.45
BRAFP15056 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
BRAFP15056 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
BRAFP15056 AC009949.1-201ENST00000623048 1830 ntBASIC17.88■□□□□ 0.45
BRAFP15056 AC016734.2-201ENST00000624325 1377 ntBASIC17.88■□□□□ 0.45
BRAFP15056 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 FLJ38576-201ENST00000623820 2459 ntBASIC17.88■□□□□ 0.45
BRAFP15056 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BRAFP15056 DOC2GP-204ENST00000639052 2548 ntBASIC17.88■□□□□ 0.45
BRAFP15056 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
BRAFP15056 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
BRAFP15056 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BRAFP15056 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
BRAFP15056 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
BRAFP15056 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.87■□□□□ 0.45
BRAFP15056 KRT18P48-201ENST00000434763 852 ntBASIC17.87■□□□□ 0.45
BRAFP15056 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.87■□□□□ 0.45
BRAFP15056 AP003733.1-201ENST00000491725 852 ntBASIC17.87■□□□□ 0.45
BRAFP15056 AC005332.3-201ENST00000589904 676 ntBASIC17.87■□□□□ 0.45
BRAFP15056 AC116407.2-201ENST00000613639 860 ntBASIC17.87■□□□□ 0.45
BRAFP15056 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
BRAFP15056 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
BRAFP15056 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.87■□□□□ 0.45
BRAFP15056 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.87■□□□□ 0.45
BRAFP15056 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 Z83836.1-201ENST00000624605 1642 ntBASIC17.87■□□□□ 0.45
BRAFP15056 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
BRAFP15056 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 TSPY22P-201ENST00000427496 604 ntBASIC17.86■□□□□ 0.45
BRAFP15056 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.86■□□□□ 0.45
BRAFP15056 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.86■□□□□ 0.45
BRAFP15056 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 AL390719.2-201ENST00000606993 987 ntBASIC17.86■□□□□ 0.45
BRAFP15056 NPAP1P7-201ENST00000613027 823 ntBASIC17.86■□□□□ 0.45
BRAFP15056 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.86■□□□□ 0.45
BRAFP15056 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
BRAFP15056 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
BRAFP15056 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
BRAFP15056 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms