Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.95■□□□□ 0.94
COL11A2P13942 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.95■□□□□ 0.94
COL11A2P13942 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL11A2P13942 AL662799.1-202ENST00000614205 422 ntBASIC20.95■□□□□ 0.94
COL11A2P13942 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
COL11A2P13942 IGHV3-72-202ENST00000621503 303 ntBASIC20.95■□□□□ 0.94
COL11A2P13942 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
COL11A2P13942 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.95■□□□□ 0.94
COL11A2P13942 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.95■□□□□ 0.94
COL11A2P13942 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.95■□□□□ 0.94
COL11A2P13942 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
COL11A2P13942 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A2P13942 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A2P13942 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COL11A2P13942 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.94■□□□□ 0.94
COL11A2P13942 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL11A2P13942 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A2P13942 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A2P13942 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.94■□□□□ 0.94
COL11A2P13942 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A2P13942 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC20.94■□□□□ 0.94
COL11A2P13942 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A2P13942 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.94■□□□□ 0.94
COL11A2P13942 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.94■□□□□ 0.94
COL11A2P13942 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.94■□□□□ 0.94
COL11A2P13942 AL132655.2-201ENST00000596276 594 ntBASIC20.94■□□□□ 0.94
COL11A2P13942 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.94■□□□□ 0.94
COL11A2P13942 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL11A2P13942 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A2P13942 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 U91328.1-201ENST00000437528 223 ntBASIC20.93■□□□□ 0.94
COL11A2P13942 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC20.93■□□□□ 0.94
COL11A2P13942 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.93■□□□□ 0.94
COL11A2P13942 LINC01451-201ENST00000623792 534 ntBASIC20.93■□□□□ 0.94
COL11A2P13942 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A2P13942 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL11A2P13942 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
COL11A2P13942 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A2P13942 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A2P13942 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A2P13942 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
COL11A2P13942 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 SPTLC1P1-201ENST00000447199 261 ntBASIC20.92■□□□□ 0.94
COL11A2P13942 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.92■□□□□ 0.94
COL11A2P13942 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A2P13942 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COL11A2P13942 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 AC009477.1-201ENST00000452936 217 ntBASIC20.92■□□□□ 0.94
COL11A2P13942 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
COL11A2P13942 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.92■□□□□ 0.94
COL11A2P13942 AC007967.4-201ENST00000614700 386 ntBASIC20.92■□□□□ 0.94
COL11A2P13942 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A2P13942 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
COL11A2P13942 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.91■□□□□ 0.94
COL11A2P13942 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.91■□□□□ 0.94
COL11A2P13942 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A2P13942 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A2P13942 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.91■□□□□ 0.94
COL11A2P13942 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A2P13942 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms