Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.4■□□□□ 0.86
TOP1P11387 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.4■□□□□ 0.86
TOP1P11387 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TOP1P11387 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.4■□□□□ 0.86
TOP1P11387 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.4■□□□□ 0.86
TOP1P11387 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.4■□□□□ 0.86
TOP1P11387 AC006557.2-201ENST00000592985 1240 ntBASIC20.4■□□□□ 0.86
TOP1P11387 AL139327.4-201ENST00000612362 153 ntBASIC20.4■□□□□ 0.86
TOP1P11387 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
TOP1P11387 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.4■□□□□ 0.86
TOP1P11387 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TOP1P11387 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.39■□□□□ 0.86
TOP1P11387 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TOP1P11387 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
TOP1P11387 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.39■□□□□ 0.85
TOP1P11387 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.39■□□□□ 0.85
TOP1P11387 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.39■□□□□ 0.85
TOP1P11387 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TOP1P11387 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.39■□□□□ 0.85
TOP1P11387 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 AL355312.1-201ENST00000407115 2176 ntBASIC20.39■□□□□ 0.85
TOP1P11387 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.39■□□□□ 0.85
TOP1P11387 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TOP1P11387 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.39■□□□□ 0.85
TOP1P11387 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.39■□□□□ 0.85
TOP1P11387 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP1P11387 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
TOP1P11387 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 NCF1C-201ENST00000438382 1427 ntBASIC20.38■□□□□ 0.85
TOP1P11387 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 AC139713.2-201ENST00000641328 2723 ntBASIC20.38■□□□□ 0.85
TOP1P11387 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.38■□□□□ 0.85
TOP1P11387 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP1P11387 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP1P11387 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP1P11387 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.38■□□□□ 0.85
TOP1P11387 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.38■□□□□ 0.85
TOP1P11387 KRT18P27-201ENST00000427733 1299 ntBASIC20.38■□□□□ 0.85
TOP1P11387 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.38■□□□□ 0.85
TOP1P11387 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.38■□□□□ 0.85
TOP1P11387 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.38■□□□□ 0.85
TOP1P11387 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.38■□□□□ 0.85
TOP1P11387 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
TOP1P11387 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 AC133963.1-201ENST00000504166 1679 ntBASIC20.38■□□□□ 0.85
TOP1P11387 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TOP1P11387 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.37■□□□□ 0.85
TOP1P11387 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 AP002414.3-201ENST00000589352 1468 ntBASIC20.37■□□□□ 0.85
TOP1P11387 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.37■□□□□ 0.85
TOP1P11387 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 AC046185.3-201ENST00000623228 1824 ntBASIC20.37■□□□□ 0.85
TOP1P11387 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TOP1P11387 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TOP1P11387 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.37■□□□□ 0.85
TOP1P11387 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.37■□□□□ 0.85
TOP1P11387 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms