Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.76■□□□□ 0.11
FREM3P0C091 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FREM3P0C091 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FREM3P0C091 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FREM3P0C091 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.75■□□□□ 0.11
FREM3P0C091 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
FREM3P0C091 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 AC133963.1-201ENST00000504166 1679 ntBASIC15.75■□□□□ 0.11
FREM3P0C091 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.75■□□□□ 0.11
FREM3P0C091 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.75■□□□□ 0.11
FREM3P0C091 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.75■□□□□ 0.11
FREM3P0C091 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 AC097637.2-201ENST00000624096 1997 ntBASIC15.75■□□□□ 0.11
FREM3P0C091 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FREM3P0C091 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.75■□□□□ 0.11
FREM3P0C091 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 ELK2BP-201ENST00000415014 1224 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.74■□□□□ 0.11
FREM3P0C091 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.74■□□□□ 0.11
FREM3P0C091 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.74■□□□□ 0.11
FREM3P0C091 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 AC106730.1-201ENST00000566722 1090 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 AC006557.2-201ENST00000592985 1240 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 AC117500.6-201ENST00000624871 588 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FREM3P0C091 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 AP002414.3-201ENST00000589352 1468 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FREM3P0C091 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
FREM3P0C091 COX5BP2-201ENST00000392354 334 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 CRYGEP-201ENST00000412192 528 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.74■□□□□ 0.11
FREM3P0C091 AC108751.1-201ENST00000490852 363 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
FREM3P0C091 AC073592.4-201ENST00000623827 446 ntBASIC15.74■□□□□ 0.11
FREM3P0C091 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms