Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.44■□□□□ 0.38
MMP2P08253 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
MMP2P08253 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.44■□□□□ 0.38
MMP2P08253 AL590787.1-201ENST00000568856 1315 ntBASIC17.44■□□□□ 0.38
MMP2P08253 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MMP2P08253 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MMP2P08253 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
MMP2P08253 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MMP2P08253 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MMP2P08253 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 AC022211.2-201ENST00000585075 2527 ntBASIC17.43■□□□□ 0.38
MMP2P08253 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
MMP2P08253 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP2P08253 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.43■□□□□ 0.38
MMP2P08253 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.43■□□□□ 0.38
MMP2P08253 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.43■□□□□ 0.38
MMP2P08253 FAAHP1-202ENST00000446499 1238 ntBASIC17.43■□□□□ 0.38
MMP2P08253 FAM197Y8-203ENST00000450145 560 ntBASIC17.43■□□□□ 0.38
MMP2P08253 AC018712.1-201ENST00000455767 687 ntBASIC17.43■□□□□ 0.38
MMP2P08253 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.43■□□□□ 0.38
MMP2P08253 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 AC148477.8-201ENST00000624298 468 ntBASIC17.43■□□□□ 0.38
MMP2P08253 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.43■□□□□ 0.38
MMP2P08253 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MMP2P08253 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
MMP2P08253 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP2P08253 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.42■□□□□ 0.38
MMP2P08253 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP2P08253 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 RPS2P1-201ENST00000434010 821 ntBASIC17.42■□□□□ 0.38
MMP2P08253 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP2P08253 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP2P08253 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.42■□□□□ 0.38
MMP2P08253 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 AC004706.3-202ENST00000621574 984 ntBASIC17.42■□□□□ 0.38
MMP2P08253 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP2P08253 AC107918.4-202ENST00000641623 219 ntBASIC17.42■□□□□ 0.38
MMP2P08253 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MMP2P08253 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MMP2P08253 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.42■□□□□ 0.38
MMP2P08253 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.42■□□□□ 0.38
MMP2P08253 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MMP2P08253 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
MMP2P08253 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
MMP2P08253 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP2P08253 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.41■□□□□ 0.38
MMP2P08253 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP2P08253 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MMP2P08253 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MMP2P08253 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP2P08253 AP002469.2-201ENST00000531724 424 ntBASIC17.41■□□□□ 0.38
MMP2P08253 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
MMP2P08253 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.41■□□□□ 0.38
MMP2P08253 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.41■□□□□ 0.38
MMP2P08253 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms