Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSBP07858 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSBP07858 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CTSBP07858 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSBP07858 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSBP07858 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.4■□□□□ 0.22
CTSBP07858 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CTSBP07858 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.4■□□□□ 0.22
CTSBP07858 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CTSBP07858 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSBP07858 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 AP002414.1-201ENST00000391405 1147 ntBASIC16.39■□□□□ 0.21
CTSBP07858 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTSBP07858 VN2R19P-201ENST00000442399 1052 ntBASIC16.39■□□□□ 0.21
CTSBP07858 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.39■□□□□ 0.21
CTSBP07858 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.39■□□□□ 0.21
CTSBP07858 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSBP07858 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSBP07858 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.39■□□□□ 0.21
CTSBP07858 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.39■□□□□ 0.21
CTSBP07858 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CTSBP07858 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.39■□□□□ 0.21
CTSBP07858 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CTSBP07858 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CTSBP07858 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 PCDHB18P-201ENST00000524813 2368 ntBASIC16.38■□□□□ 0.21
CTSBP07858 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.38■□□□□ 0.21
CTSBP07858 HCG4B-203ENST00000450128 991 ntBASIC16.38■□□□□ 0.21
CTSBP07858 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.38■□□□□ 0.21
CTSBP07858 AC092865.6-201ENST00000642101 219 ntBASIC16.38■□□□□ 0.21
CTSBP07858 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTSBP07858 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.38■□□□□ 0.21
CTSBP07858 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CTSBP07858 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CTSBP07858 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CTSBP07858 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.37■□□□□ 0.21
CTSBP07858 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.37■□□□□ 0.21
CTSBP07858 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 CRYGEP-201ENST00000412192 528 ntBASIC16.37■□□□□ 0.21
CTSBP07858 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 AL591424.1-201ENST00000442569 1213 ntBASIC16.37■□□□□ 0.21
CTSBP07858 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.37■□□□□ 0.21
CTSBP07858 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.37■□□□□ 0.21
CTSBP07858 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.37■□□□□ 0.21
CTSBP07858 AC092865.5-201ENST00000545435 363 ntBASIC16.37■□□□□ 0.21
CTSBP07858 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.37■□□□□ 0.21
CTSBP07858 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
CTSBP07858 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.37■□□□□ 0.21
CTSBP07858 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CTSBP07858 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CTSBP07858 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.37■□□□□ 0.21
CTSBP07858 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.37■□□□□ 0.21
CTSBP07858 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CTSBP07858 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSBP07858 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CTSBP07858 AC141586.5-201ENST00000624546 2050 ntBASIC16.36■□□□□ 0.21
CTSBP07858 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms