Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC011467.2-201ENST00000598425 242 ntBASIC17.47■□□□□ 0.39
VAPBO95292 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.47■□□□□ 0.39
VAPBO95292 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
VAPBO95292 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.47■□□□□ 0.39
VAPBO95292 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 AC093525.9-201ENST00000624961 1746 ntBASIC17.47■□□□□ 0.39
VAPBO95292 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VAPBO95292 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.46■□□□□ 0.39
VAPBO95292 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 NKILA-202ENST00000614771 2598 ntBASIC17.46■□□□□ 0.39
VAPBO95292 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 AL353593.2-201ENST00000602529 1483 ntBASIC17.46■□□□□ 0.39
VAPBO95292 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VAPBO95292 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.46■□□□□ 0.39
VAPBO95292 LINC00265-3P-201ENST00000447588 903 ntBASIC17.46■□□□□ 0.39
VAPBO95292 KRT17P6-201ENST00000453795 1220 ntBASIC17.46■□□□□ 0.39
VAPBO95292 MINOS1P3-201ENST00000457048 203 ntBASIC17.46■□□□□ 0.39
VAPBO95292 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.46■□□□□ 0.39
VAPBO95292 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.46■□□□□ 0.39
VAPBO95292 STK25P1-201ENST00000585406 838 ntBASIC17.46■□□□□ 0.39
VAPBO95292 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.46■□□□□ 0.39
VAPBO95292 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.46■□□□□ 0.39
VAPBO95292 AC060834.1-201ENST00000443027 2032 ntBASIC17.46■□□□□ 0.39
VAPBO95292 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 AL121761.2-201ENST00000598007 1648 ntBASIC17.46■□□□□ 0.39
VAPBO95292 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
VAPBO95292 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.46■□□□□ 0.39
VAPBO95292 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
VAPBO95292 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.46■□□□□ 0.38
VAPBO95292 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
VAPBO95292 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
VAPBO95292 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
VAPBO95292 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
VAPBO95292 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPBO95292 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VAPBO95292 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.45■□□□□ 0.38
VAPBO95292 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPBO95292 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPBO95292 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VAPBO95292 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.45■□□□□ 0.38
VAPBO95292 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 AC011676.5-201ENST00000624864 2660 ntBASIC17.45■□□□□ 0.38
VAPBO95292 NSUN5P1-202ENST00000421140 1535 ntBASIC17.45■□□□□ 0.38
VAPBO95292 NSUN5P2-203ENST00000457352 1529 ntBASIC17.45■□□□□ 0.38
VAPBO95292 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
VAPBO95292 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.45■□□□□ 0.38
VAPBO95292 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VAPBO95292 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
VAPBO95292 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms