Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AL596257.1-201ENST00000641463 2694 ntBASIC11.92□□□□□ -0.5
NDUFA1O15239 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
NDUFA1O15239 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
NDUFA1O15239 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 AGK-211ENST00000629555 2765 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 AC022188.1-201ENST00000620960 1664 ntBASIC11.91□□□□□ -0.5
NDUFA1O15239 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 LINC02199-201ENST00000506655 2702 ntBASIC11.91□□□□□ -0.5
NDUFA1O15239 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC11.91□□□□□ -0.5
NDUFA1O15239 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 BANP-204ENST00000393208 2283 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 AC006449.5-201ENST00000610658 2098 ntBASIC11.91□□□□□ -0.5
NDUFA1O15239 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
NDUFA1O15239 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFA1O15239 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
NDUFA1O15239 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFA1O15239 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
NDUFA1O15239 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
NDUFA1O15239 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 AC008741.2-201ENST00000612792 3115 ntBASIC11.9□□□□□ -0.5
NDUFA1O15239 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFA1O15239 AL513523.2-202ENST00000427283 2040 ntBASIC11.9□□□□□ -0.5
NDUFA1O15239 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC11.9□□□□□ -0.5
NDUFA1O15239 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.9□□□□□ -0.5
NDUFA1O15239 NAPSB-206ENST00000562112 1266 ntBASIC11.9□□□□□ -0.5
NDUFA1O15239 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFA1O15239 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFA1O15239 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms