Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.79■□□□□ 0.92
SEMA3EO15041 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.79■□□□□ 0.92
SEMA3EO15041 AL138688.1-201ENST00000624851 1594 ntBASIC20.79■□□□□ 0.92
SEMA3EO15041 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SEMA3EO15041 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.79■□□□□ 0.92
SEMA3EO15041 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SEMA3EO15041 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SEMA3EO15041 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEMA3EO15041 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.78■□□□□ 0.92
SEMA3EO15041 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.78■□□□□ 0.92
SEMA3EO15041 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.78■□□□□ 0.92
SEMA3EO15041 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.78■□□□□ 0.92
SEMA3EO15041 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.78■□□□□ 0.92
SEMA3EO15041 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEMA3EO15041 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.78■□□□□ 0.92
SEMA3EO15041 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.77■□□□□ 0.92
SEMA3EO15041 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA3EO15041 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 AC107918.2-201ENST00000530817 355 ntBASIC20.77■□□□□ 0.92
SEMA3EO15041 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.77■□□□□ 0.92
SEMA3EO15041 MIR4469-201ENST00000583919 79 ntBASIC20.77■□□□□ 0.92
SEMA3EO15041 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.77■□□□□ 0.92
SEMA3EO15041 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.77■□□□□ 0.92
SEMA3EO15041 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SEMA3EO15041 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
SEMA3EO15041 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.77■□□□□ 0.91
SEMA3EO15041 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.77■□□□□ 0.91
SEMA3EO15041 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.77■□□□□ 0.91
SEMA3EO15041 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SEMA3EO15041 ELL2P1-201ENST00000413990 1906 ntBASIC20.76■□□□□ 0.91
SEMA3EO15041 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 GNAS-203ENST00000306120 1878 ntBASIC20.76■□□□□ 0.91
SEMA3EO15041 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
SEMA3EO15041 ACTG1P14-201ENST00000446382 1122 ntBASIC20.76■□□□□ 0.91
SEMA3EO15041 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.76■□□□□ 0.91
SEMA3EO15041 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEMA3EO15041 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SEMA3EO15041 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA3EO15041 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SEMA3EO15041 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SEMA3EO15041 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.75■□□□□ 0.91
SEMA3EO15041 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.75■□□□□ 0.91
SEMA3EO15041 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms