Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 AL596257.1-201ENST00000641463 2694 ntBASIC18.58■□□□□ 0.56
CTAGE9A4FU28 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 AL662844.4-201ENST00000606367 2838 ntBASIC18.58■□□□□ 0.56
CTAGE9A4FU28 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CTAGE9A4FU28 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TSPY7P-201ENST00000431358 1114 ntBASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AP006294.2-201ENST00000641667 209 ntBASIC18.57■□□□□ 0.56
CTAGE9A4FU28 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 KRT8P9-201ENST00000558927 1449 ntBASIC18.57■□□□□ 0.56
CTAGE9A4FU28 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CTAGE9A4FU28 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 UNC93B2-201ENST00000285383 730 ntBASIC18.56■□□□□ 0.56
CTAGE9A4FU28 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.56■□□□□ 0.56
CTAGE9A4FU28 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 MIR4785-201ENST00000585005 73 ntBASIC18.56■□□□□ 0.56
CTAGE9A4FU28 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AC022188.1-201ENST00000620960 1664 ntBASIC18.56■□□□□ 0.56
CTAGE9A4FU28 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.56■□□□□ 0.56
CTAGE9A4FU28 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 AC007950.2-201ENST00000615045 2347 ntBASIC18.55■□□□□ 0.56
CTAGE9A4FU28 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.55■□□□□ 0.56
CTAGE9A4FU28 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms