Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 FITM1-202ENST00000559294 800 ntBASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AP000525.1-201ENST00000608286 694 ntBASIC15.14■□□□□ 0.01
SHISA3A0PJX4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.14■□□□□ 0.01
SHISA3A0PJX4 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 UNC93B2-201ENST00000285383 730 ntBASIC15.13■□□□□ 0.01
SHISA3A0PJX4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 AC012618.2-201ENST00000428058 849 ntBASIC15.13■□□□□ 0.01
SHISA3A0PJX4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 MST1L-201ENST00000442552 2185 ntBASIC15.13■□□□□ 0.01
SHISA3A0PJX4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SHISA3A0PJX4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 PRORSD1P-201ENST00000295112 541 ntBASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AL645728.1-201ENST00000366221 2101 ntBASIC15.12■□□□□ 0.01
SHISA3A0PJX4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AC066615.1-201ENST00000640911 628 ntBASIC15.12■□□□□ 0.01
SHISA3A0PJX4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHISA3A0PJX4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms