Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
NINLQ9Y2I6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC23.62■■□□□ 1.37
NINLQ9Y2I6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.62■■□□□ 1.37
NINLQ9Y2I6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
NINLQ9Y2I6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
NINLQ9Y2I6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 BCAR1-209ENST00000546196 1340 ntBASIC23.61■■□□□ 1.37
NINLQ9Y2I6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 EGFEM1P-202ENST00000431685 1563 ntBASIC23.61■■□□□ 1.37
NINLQ9Y2I6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
NINLQ9Y2I6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 AC016396.2-201ENST00000562575 1417 ntBASIC23.6■■□□□ 1.37
NINLQ9Y2I6 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 AC005829.1-201ENST00000570002 483 ntBASIC23.6■■□□□ 1.37
NINLQ9Y2I6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
NINLQ9Y2I6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 PON3-203ENST00000427422 894 ntTSL 3 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 AC068880.1-201ENST00000507289 2297 ntBASIC23.59■■□□□ 1.37
NINLQ9Y2I6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
NINLQ9Y2I6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 AC068137.2-201ENST00000605408 478 ntBASIC23.58■■□□□ 1.37
NINLQ9Y2I6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
NINLQ9Y2I6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NINLQ9Y2I6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC23.58■■□□□ 1.36
NINLQ9Y2I6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
NINLQ9Y2I6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 AC211486.1-202ENST00000416371 468 ntBASIC23.57■■□□□ 1.36
NINLQ9Y2I6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.57■■□□□ 1.36
NINLQ9Y2I6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms