Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
GTF2IRD1Q9UHL9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 NOC2LP1-202ENST00000452600 2235 ntBASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 AC023141.5-201ENST00000458585 616 ntBASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 AC004449.1-201ENST00000564240 433 ntBASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GTF2IRD1Q9UHL9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
GTF2IRD1Q9UHL9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 AC002056.1-201ENST00000395613 760 ntBASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 FAM8A3P-201ENST00000427218 844 ntBASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 AC011467.4-201ENST00000594891 528 ntBASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 AC092364.2-202ENST00000597012 1073 ntBASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GTF2IRD1Q9UHL9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.98■□□□□ 0.63
GTF2IRD1Q9UHL9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms