Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRIT1Q9P2V4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 IGLL3P-201ENST00000412472 434 ntBASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIT1Q9P2V4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.77■□□□□ 0.27
LRIT1Q9P2V4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 AL590787.1-201ENST00000568856 1315 ntBASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 AL135999.2-201ENST00000622438 1686 ntBASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 NOC2LP1-202ENST00000452600 2235 ntBASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 AC096734.2-201ENST00000562054 433 ntBASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIT1Q9P2V4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 DNAJB3-202ENST00000449667 1266 ntBASIC16.75■□□□□ 0.27
LRIT1Q9P2V4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms