Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ALG1L8P-201ENST00000533887 760 ntBASIC18.2■□□□□ 0.5
CHD7Q9P2D1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 SPDYE7P-202ENST00000420373 878 ntBASIC18.2■□□□□ 0.5
CHD7Q9P2D1 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 MIR6080-201ENST00000617359 66 ntBASIC18.2■□□□□ 0.5
CHD7Q9P2D1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD7Q9P2D1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 GIMAP3P-201ENST00000495150 836 ntBASIC18.19■□□□□ 0.5
CHD7Q9P2D1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 AL009183.1-201ENST00000603760 355 ntBASIC18.19■□□□□ 0.5
CHD7Q9P2D1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHD7Q9P2D1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 DGCR5-201ENST00000399539 862 ntBASIC18.18■□□□□ 0.5
CHD7Q9P2D1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 SPTSSB-204ENST00000617024 1292 ntBASIC18.18■□□□□ 0.5
CHD7Q9P2D1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.18■□□□□ 0.5
CHD7Q9P2D1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 IGHV3-42-201ENST00000520410 361 ntBASIC18.17■□□□□ 0.5
CHD7Q9P2D1 AC109635.5-201ENST00000533593 962 ntBASIC18.17■□□□□ 0.5
CHD7Q9P2D1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 AC002558.1-201ENST00000488906 803 ntBASIC18.17■□□□□ 0.5
CHD7Q9P2D1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHD7Q9P2D1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHD7Q9P2D1 AC241585.1-201ENST00000433527 519 ntBASIC18.16■□□□□ 0.5
CHD7Q9P2D1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms