Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 UXT-AS1-201ENST00000590504 1525 ntBASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC24.64■■□□□ 1.53
SLC52A1Q9NWF4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 WASH6P-202ENST00000359512 1437 ntBASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 MIR346-201ENST00000362234 95 ntBASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
SLC52A1Q9NWF4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 GAPDHP21-201ENST00000450301 1010 ntBASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 AC097493.3-201ENST00000509725 367 ntBASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 MIR3909-201ENST00000579518 119 ntBASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 AL390754.1-201ENST00000619088 582 ntBASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 AL353732.1-201ENST00000569618 1459 ntBASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SLC52A1Q9NWF4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 AC008267.7-201ENST00000624570 1194 ntBASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 BX323043.1-201ENST00000641006 1765 ntBASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 LINC00304-203ENST00000565008 1864 ntBASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SLC52A1Q9NWF4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 HCG4-201ENST00000418983 998 ntBASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 AC069120.2-201ENST00000524091 540 ntBASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SLC52A1Q9NWF4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 LYSMD4-203ENST00000378904 2122 ntBASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 AC093503.3-201ENST00000624917 2352 ntBASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PPP6R2P1-201ENST00000450880 1275 ntBASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 ALG1L8P-201ENST00000533887 760 ntBASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 AP000842.3-202ENST00000569238 1080 ntBASIC24.59■■□□□ 1.53
SLC52A1Q9NWF4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms