Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 MIR3917-201ENST00000580971 93 ntBASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 AC106795.5-201ENST00000623288 454 ntBASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXD4L1Q9NU39 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 SNORA78-201ENST00000459373 127 ntBASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 AC008550.1-201ENST00000511500 884 ntBASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 MKKS-203ENST00000609375 882 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 AC243964.3-201ENST00000623022 2028 ntBASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXD4L1Q9NU39 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 CICP6-201ENST00000457191 2729 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 TSPY14P-201ENST00000303979 915 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ECEL1P2-202ENST00000465689 757 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 RN7SL819P-201ENST00000581896 270 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 MIR4785-201ENST00000585005 73 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 AC008507.2-201ENST00000588402 1176 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 AC084782.3-201ENST00000612282 578 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 AC010653.2-201ENST00000623505 997 ntBASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXD4L1Q9NU39 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
FOXD4L1Q9NU39 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms