Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 AC134043.2-201ENST00000624206 2238 ntBASIC18.71■□□□□ 0.59
NXF3Q9H4D5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.71■□□□□ 0.59
NXF3Q9H4D5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
NXF3Q9H4D5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 DNAJB3-201ENST00000446806 729 ntBASIC18.7■□□□□ 0.58
NXF3Q9H4D5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NXF3Q9H4D5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 AC002310.6-201ENST00000624451 1377 ntBASIC18.69■□□□□ 0.58
NXF3Q9H4D5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.69■□□□□ 0.58
NXF3Q9H4D5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NXF3Q9H4D5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 PAWRP1-201ENST00000451083 565 ntBASIC18.68■□□□□ 0.58
NXF3Q9H4D5 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 AL691403.2-201ENST00000618460 490 ntBASIC18.68■□□□□ 0.58
NXF3Q9H4D5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NXF3Q9H4D5 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.67■□□□□ 0.58
NXF3Q9H4D5 MIR3687-2-201ENST00000577708 61 ntBASIC18.67■□□□□ 0.58
NXF3Q9H4D5 MTDHP5-201ENST00000598980 586 ntBASIC18.67■□□□□ 0.58
NXF3Q9H4D5 MIR3687-1-201ENST00000614492 61 ntBASIC18.67■□□□□ 0.58
NXF3Q9H4D5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms