Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
POLR2J3Q9H1A7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 AC005521.1-201ENST00000393351 872 ntBASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.09■□□□□ 0.17
POLR2J3Q9H1A7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
POLR2J3Q9H1A7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AK4P3-201ENST00000418260 669 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 KRT18P38-201ENST00000449496 1282 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AC092647.4-201ENST00000457211 535 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 GUSBP12-201ENST00000513727 720 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 PCDHA14-201ENST00000506751 2298 ntBASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.08■□□□□ 0.16
POLR2J3Q9H1A7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
POLR2J3Q9H1A7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms