Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 LIN28AP1-201ENST00000429574 405 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AC103564.2-201ENST00000432853 1299 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 BX664615.1-201ENST00000443558 458 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AC010203.1-204ENST00000548782 407 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AC109462.3-201ENST00000573934 613 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PHACTR1Q9C0D0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.64■□□□□ 0.42
PHACTR1Q9C0D0 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PHACTR1Q9C0D0 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.64■□□□□ 0.42
PHACTR1Q9C0D0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 HOMER2P1-201ENST00000455653 964 ntBASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 YBX1P2-201ENST00000489612 999 ntBASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PHACTR1Q9C0D0 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 AL049757.1-201ENST00000616842 1596 ntBASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 ATP5G1P1-201ENST00000448724 379 ntBASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 AC111152.3-201ENST00000569699 673 ntBASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 STK25P1-201ENST00000585406 838 ntBASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 AC125634.1-201ENST00000438758 1403 ntBASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PHACTR1Q9C0D0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PHACTR1Q9C0D0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHACTR1Q9C0D0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PHACTR1Q9C0D0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.62■□□□□ 0.41
PHACTR1Q9C0D0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PHACTR1Q9C0D0 UBALD1-205ENST00000590891 2641 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms