Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC026691.1-201ENST00000602502 2017 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC006015.1-201ENST00000429970 570 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MCCD1P1-208ENST00000445732 328 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LGR4-203ENST00000480977 492 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 F2R-202ENST00000505600 442 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC060766.5-201ENST00000590539 871 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AL513523.2-202ENST00000427283 2040 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 AC060834.1-201ENST00000443027 2032 ntBASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
LCE3DQ9BYE3 MIR193BHG-211ENST00000641433 5365 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms