Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.54□□□□□ -0.08
SSBP3Q9BWW4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 AC132938.5-201ENST00000624980 1813 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 LAGE3P1-201ENST00000425356 484 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 HNRNPDP1-201ENST00000439535 754 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 AC139887.3-201ENST00000568585 713 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 MIR7706-201ENST00000613747 67 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 BX640515.1-201ENST00000617215 977 ntBASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SSBP3Q9BWW4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.52□□□□□ -0.08
SSBP3Q9BWW4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 PRYP5-201ENST00000451909 266 ntBASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 SIGLEC30P-201ENST00000455569 941 ntBASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AC107918.4-202ENST00000641623 219 ntBASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SSBP3Q9BWW4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms