Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 AC002347.1-201ENST00000569543 541 ntBASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPAP1Q9BWH6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AC007967.2-201ENST00000432613 625 ntBASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AC136632.2-201ENST00000512891 861 ntBASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPAP1Q9BWH6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPAP1Q9BWH6 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 MYCLP1-201ENST00000372451 1075 ntBASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 AL139424.1-201ENST00000607572 797 ntBASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP1Q9BWH6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC21.02■□□□□ 0.96
RPAP1Q9BWH6 AC004967.1-201ENST00000453589 447 ntBASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms