Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLF1Q9BQI6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 RPSAP43-201ENST00000402237 625 ntBASIC20.19■□□□□ 0.82
SLF1Q9BQI6 AC023274.1-201ENST00000418278 595 ntBASIC20.19■□□□□ 0.82
SLF1Q9BQI6 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 AC004832.2-201ENST00000426397 482 ntBASIC20.19■□□□□ 0.82
SLF1Q9BQI6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 AC002347.1-201ENST00000569543 541 ntBASIC20.19■□□□□ 0.82
SLF1Q9BQI6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLF1Q9BQI6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 AC138028.4-201ENST00000564984 1845 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 DNAJB3-201ENST00000446806 729 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 KRT18P2-201ENST00000447938 1258 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 MIR4751-201ENST00000578027 74 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 AC055717.3-201ENST00000622967 595 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 AL805961.1-202ENST00000641562 540 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLF1Q9BQI6 HTR7P1-202ENST00000624664 4411 ntBASIC20.18■□□□□ 0.82
SLF1Q9BQI6 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 CRYGEP-201ENST00000412192 528 ntBASIC20.17■□□□□ 0.82
SLF1Q9BQI6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AL353135.1-201ENST00000606729 504 ntBASIC20.17■□□□□ 0.82
SLF1Q9BQI6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 GPR89P-201ENST00000407924 1495 ntBASIC20.17■□□□□ 0.82
SLF1Q9BQI6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLF1Q9BQI6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLF1Q9BQI6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms