Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 AC008687.5-201ENST00000593746 558 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 AC068587.9-201ENST00000641814 219 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 AL138781.2-201ENST00000617896 1843 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 PCDHB18P-201ENST00000524813 2368 ntBASIC17.55■□□□□ 0.4
PHOX2BQ99453 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PHOX2BQ99453 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.55■□□□□ 0.4
PHOX2BQ99453 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 PIN1P1-201ENST00000412108 996 ntBASIC17.54■□□□□ 0.4
PHOX2BQ99453 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.54■□□□□ 0.4
PHOX2BQ99453 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PHOX2BQ99453 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PHOX2BQ99453 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 FAM58DP-201ENST00000428076 619 ntBASIC17.53■□□□□ 0.4
PHOX2BQ99453 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 AC069335.1-201ENST00000489972 472 ntBASIC17.53■□□□□ 0.4
PHOX2BQ99453 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 AD001527.2-201ENST00000622994 785 ntBASIC17.53■□□□□ 0.4
PHOX2BQ99453 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PHOX2BQ99453 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
PHOX2BQ99453 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 MIR1909-201ENST00000411312 80 ntBASIC17.52■□□□□ 0.4
PHOX2BQ99453 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 KRT8P48-201ENST00000515599 1220 ntBASIC17.52■□□□□ 0.4
PHOX2BQ99453 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PHOX2BQ99453 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.52■□□□□ 0.4
PHOX2BQ99453 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms