Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC28.37■■■□□ 2.13
IFT140Q96RY7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
IFT140Q96RY7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC28.37■■■□□ 2.13
IFT140Q96RY7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
IFT140Q96RY7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
IFT140Q96RY7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
IFT140Q96RY7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
IFT140Q96RY7 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC28.36■■■□□ 2.13
IFT140Q96RY7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
IFT140Q96RY7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC28.35■■■□□ 2.13
IFT140Q96RY7 SLC22A20-204ENST00000530038 1673 ntBASIC28.35■■■□□ 2.13
IFT140Q96RY7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
IFT140Q96RY7 AFG3L1P-217ENST00000557444 2447 ntBASIC28.35■■■□□ 2.13
IFT140Q96RY7 AL035456.1-201ENST00000456064 1369 ntBASIC28.35■■■□□ 2.13
IFT140Q96RY7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC28.35■■■□□ 2.13
IFT140Q96RY7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
IFT140Q96RY7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
IFT140Q96RY7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
IFT140Q96RY7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 AL080243.2-201ENST00000418783 582 ntBASIC28.34■■■□□ 2.13
IFT140Q96RY7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 AL139327.4-201ENST00000612362 153 ntBASIC28.34■■■□□ 2.13
IFT140Q96RY7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 AL133338.1-201ENST00000565695 1517 ntBASIC28.34■■■□□ 2.13
IFT140Q96RY7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
IFT140Q96RY7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC28.34■■■□□ 2.13
IFT140Q96RY7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
IFT140Q96RY7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC28.33■■■□□ 2.13
IFT140Q96RY7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
IFT140Q96RY7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC28.33■■■□□ 2.13
IFT140Q96RY7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
IFT140Q96RY7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC28.33■■■□□ 2.13
IFT140Q96RY7 BANF1P1-201ENST00000553684 263 ntBASIC28.33■■■□□ 2.13
IFT140Q96RY7 AC091167.2-201ENST00000579581 588 ntBASIC28.33■■■□□ 2.13
IFT140Q96RY7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
IFT140Q96RY7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
IFT140Q96RY7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.12
IFT140Q96RY7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.12
IFT140Q96RY7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 MIR4259-201ENST00000584466 101 ntBASIC28.32■■■□□ 2.12
IFT140Q96RY7 AC008494.3-201ENST00000606615 944 ntBASIC28.32■■■□□ 2.12
IFT140Q96RY7 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
IFT140Q96RY7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
IFT140Q96RY7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
IFT140Q96RY7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
IFT140Q96RY7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
IFT140Q96RY7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
IFT140Q96RY7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 AC011495.1-201ENST00000498085 584 ntBASIC28.31■■■□□ 2.12
IFT140Q96RY7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC28.31■■■□□ 2.12
IFT140Q96RY7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms