Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 FAM86MP-201ENST00000340703 885 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC009477.1-201ENST00000452936 217 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 FAM8A2P-201ENST00000528813 1142 ntBASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CSMD1Q96PZ7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 TSSK5P-201ENST00000423978 907 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC132938.2-201ENST00000579188 680 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC007064.4-201ENST00000637740 555 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AL591163.1-201ENST00000641757 987 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AL133338.1-201ENST00000565695 1517 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC026150.2-201ENST00000564693 1156 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 AC007541.1-201ENST00000570282 1469 ntBASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CSMD1Q96PZ7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 AC068587.10-201ENST00000641210 219 ntBASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TNXA-203ENST00000507684 2038 ntBASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 DGCR5-201ENST00000399539 862 ntBASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 RBPMS2P1-201ENST00000437762 623 ntBASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 FAM185BP-201ENST00000443595 716 ntBASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CSMD1Q96PZ7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms