Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NEK1Q96PY6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 AL020989.1-201ENST00000422979 469 ntBASIC20.57■□□□□ 0.88
NEK1Q96PY6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 LINC02012-201ENST00000608206 1725 ntBASIC20.57■□□□□ 0.88
NEK1Q96PY6 AP001269.4-201ENST00000609611 512 ntBASIC20.57■□□□□ 0.88
NEK1Q96PY6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NEK1Q96PY6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
NEK1Q96PY6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 AP005117.1-201ENST00000584346 1413 ntBASIC20.56■□□□□ 0.88
NEK1Q96PY6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 SPDYE21P-201ENST00000413323 827 ntBASIC20.56■□□□□ 0.88
NEK1Q96PY6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.56■□□□□ 0.88
NEK1Q96PY6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NEK1Q96PY6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 SIGLEC30P-201ENST00000455569 941 ntBASIC20.55■□□□□ 0.88
NEK1Q96PY6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 AL732292.2-201ENST00000609649 430 ntBASIC20.55■□□□□ 0.88
NEK1Q96PY6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NEK1Q96PY6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
NEK1Q96PY6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK1Q96PY6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
NEK1Q96PY6 PCDHA12-202ENST00000613593 2588 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms