Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.45■□□□□ 0.22
COL21A1Q96P44 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 BX276092.7-203ENST00000637198 1536 ntBASIC16.45■□□□□ 0.22
COL21A1Q96P44 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COL21A1Q96P44 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 HCG4P8-203ENST00000443049 980 ntBASIC16.44■□□□□ 0.22
COL21A1Q96P44 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 AP000867.3-201ENST00000524675 377 ntBASIC16.44■□□□□ 0.22
COL21A1Q96P44 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CROCCP1-201ENST00000426910 5675 ntBASIC16.44■□□□□ 0.22
COL21A1Q96P44 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COL21A1Q96P44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COL21A1Q96P44 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COL21A1Q96P44 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COL21A1Q96P44 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms