Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 BCAR1-209ENST00000546196 1340 ntBASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC46A1Q96NT5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 RHOQP3-201ENST00000437982 621 ntBASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AC074386.1-202ENST00000463561 864 ntBASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AC010507.1-201ENST00000633895 436 ntBASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC46A1Q96NT5 AC100803.2-201ENST00000562459 1963 ntBASIC16.58■□□□□ 0.25
SLC46A1Q96NT5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC46A1Q96NT5 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC46A1Q96NT5 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC46A1Q96NT5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SLC46A1Q96NT5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 AP002414.1-201ENST00000391405 1147 ntBASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 PTCHD3P3-201ENST00000403073 906 ntBASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TSEN15P1-201ENST00000423257 515 ntBASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC46A1Q96NT5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms