Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AC012618.2-201ENST00000428058 849 ntBASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 NUDT16P1-203ENST00000513809 620 ntBASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AC113410.3-201ENST00000623366 203 ntBASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 AC092053.1-201ENST00000605787 1936 ntBASIC17.55■□□□□ 0.4
CHMP6Q96FZ7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 AC233702.5-201ENST00000584107 538 ntBASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMP6Q96FZ7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 MIR718-201ENST00000390190 70 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 AC097488.1-201ENST00000507834 756 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 AP000692.2-201ENST00000608391 879 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 LINC01311-201ENST00000565162 1445 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 TSPY26P-202ENST00000565928 3884 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 AC005052.1-201ENST00000625181 2492 ntBASIC17.53■□□□□ 0.4
CHMP6Q96FZ7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CHMP6Q96FZ7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms