Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM12Q96EX1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 AC026366.1-201ENST00000488803 879 ntBASIC13.28□□□□□ -0.28
SMIM12Q96EX1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 PCDHB17P-201ENST00000539533 2393 ntBASIC13.28□□□□□ -0.28
SMIM12Q96EX1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SMIM12Q96EX1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 AC092068.3-201ENST00000587894 2016 ntBASIC13.27□□□□□ -0.28
SMIM12Q96EX1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SMIM12Q96EX1 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 MESTP1-201ENST00000404287 994 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 AC113404.2-201ENST00000507884 177 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 AC010240.3-201ENST00000607688 395 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 KRT8P9-201ENST00000558927 1449 ntBASIC13.27□□□□□ -0.29
SMIM12Q96EX1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SMIM12Q96EX1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms