Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 AP002414.1-201ENST00000391405 1147 ntBASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 PTCHD3P3-201ENST00000403073 906 ntBASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 RNA5SP415-201ENST00000517246 115 ntBASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 TERC-201ENST00000602385 541 ntBASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 AC008667.4-201ENST00000607370 168 ntBASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.34■□□□□ 0.37
ECHDC3Q96DC8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ECHDC3Q96DC8 CROCCP2-202ENST00000412962 2773 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 AL022342.1-201ENST00000400363 863 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 AP000347.1-202ENST00000435868 847 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 RPL13AP23-201ENST00000480739 586 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 IGHV3-65-201ENST00000523210 341 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 UNC93B6-202ENST00000528242 690 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 AC090340.1-201ENST00000620778 4980 ntBASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ECHDC3Q96DC8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 AC009947.1-201ENST00000444350 727 ntBASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 AC106730.1-201ENST00000566722 1090 ntBASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 Z83851.2-201ENST00000609564 659 ntBASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ECHDC3Q96DC8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 LETM1P2-201ENST00000597330 2178 ntBASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 AC093525.9-201ENST00000624961 1746 ntBASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
ECHDC3Q96DC8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms