Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 AC099336.1-202ENST00000602961 463 ntBASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 AL135999.2-201ENST00000622438 1686 ntBASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 PMPCAP1-201ENST00000508114 1576 ntBASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDF1Q96CC6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 KLF4P1-201ENST00000412782 1185 ntBASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AC093458.2-201ENST00000623150 629 ntBASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 AC060834.1-201ENST00000443027 2032 ntBASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RHBDF1Q96CC6 NKILA-202ENST00000614771 2598 ntBASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RHBDF1Q96CC6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms