Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.06■■□□□ 1.12
SMARCC1Q92922 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMARCC1Q92922 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC22.06■■□□□ 1.12
SMARCC1Q92922 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SMARCC1Q92922 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 UGT1A2P-201ENST00000454886 866 ntBASIC22.05■■□□□ 1.12
SMARCC1Q92922 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 AC026150.2-201ENST00000564693 1156 ntBASIC22.05■■□□□ 1.12
SMARCC1Q92922 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 AC005412.3-201ENST00000580309 715 ntBASIC22.05■■□□□ 1.12
SMARCC1Q92922 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMARCC1Q92922 FLJ13224-201ENST00000313737 1514 ntBASIC22.05■■□□□ 1.12
SMARCC1Q92922 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC22.05■■□□□ 1.12
SMARCC1Q92922 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMARCC1Q92922 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SMARCC1Q92922 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 TREML5P-201ENST00000421694 576 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 SPDYE14P-201ENST00000442619 822 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 SLC25A39P2-201ENST00000537614 270 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 LINC02560-201ENST00000596379 459 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 AL009183.1-201ENST00000603760 355 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 AL158211.3-201ENST00000607385 239 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 AC008761.3-201ENST00000624803 892 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 REXO1L11P-201ENST00000620964 1927 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMARCC1Q92922 AC008677.1-201ENST00000519230 1561 ntBASIC22.03■■□□□ 1.12
SMARCC1Q92922 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.03■■□□□ 1.12
SMARCC1Q92922 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 UXT-AS1-201ENST00000590504 1525 ntBASIC22.02■■□□□ 1.12
SMARCC1Q92922 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC1Q92922 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC1Q92922 EDF1-203ENST00000371649 790 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC1Q92922 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMARCC1Q92922 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.02■■□□□ 1.12
SMARCC1Q92922 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms