Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SHC3Q92529 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 ACTG1P4-201ENST00000425123 1122 ntBASIC18.52■□□□□ 0.56
SHC3Q92529 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHC3Q92529 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.52■□□□□ 0.56
SHC3Q92529 AC124947.2-201ENST00000547118 1133 ntBASIC18.52■□□□□ 0.56
SHC3Q92529 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
SHC3Q92529 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SHC3Q92529 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHC3Q92529 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SHC3Q92529 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHC3Q92529 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SHC3Q92529 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.52■□□□□ 0.55
SHC3Q92529 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
SHC3Q92529 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.51■□□□□ 0.55
SHC3Q92529 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.51■□□□□ 0.55
SHC3Q92529 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.51■□□□□ 0.55
SHC3Q92529 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.51■□□□□ 0.55
SHC3Q92529 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.51■□□□□ 0.55
SHC3Q92529 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.51■□□□□ 0.55
SHC3Q92529 AL732292.2-201ENST00000609649 430 ntBASIC18.51■□□□□ 0.55
SHC3Q92529 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.51■□□□□ 0.55
SHC3Q92529 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SHC3Q92529 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHC3Q92529 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHC3Q92529 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SHC3Q92529 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.5■□□□□ 0.55
SHC3Q92529 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.5■□□□□ 0.55
SHC3Q92529 TSPY19P-201ENST00000418461 509 ntBASIC18.5■□□□□ 0.55
SHC3Q92529 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.5■□□□□ 0.55
SHC3Q92529 TSPY18P-201ENST00000441642 509 ntBASIC18.5■□□□□ 0.55
SHC3Q92529 KRT18P31-201ENST00000506277 1292 ntBASIC18.5■□□□□ 0.55
SHC3Q92529 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.5■□□□□ 0.55
SHC3Q92529 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.5■□□□□ 0.55
SHC3Q92529 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SHC3Q92529 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHC3Q92529 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.49■□□□□ 0.55
SHC3Q92529 RBM17P3-201ENST00000417687 1192 ntBASIC18.49■□□□□ 0.55
SHC3Q92529 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHC3Q92529 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.49■□□□□ 0.55
SHC3Q92529 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms