Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AP001160.2-201ENST00000596071 487 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC148477.5-201ENST00000625164 1645 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RDX-218ENST00000544551 4117 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 HTR5BP-201ENST00000430851 1154 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ESPNP-201ENST00000270691 2015 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 SIRPAP1-201ENST00000448467 1770 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC126763.1-201ENST00000552015 2118 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 AC097374.2-201ENST00000618617 1306 ntBASIC5.39□□□□□ -1.55
SYNE1Q8NF91 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SYNE1Q8NF91 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 FAM220CP-201ENST00000395253 831 ntBASIC5.38□□□□□ -1.55
SYNE1Q8NF91 AC098831.1-202ENST00000438821 336 ntBASIC5.38□□□□□ -1.55
SYNE1Q8NF91 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SYNE1Q8NF91 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms