Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC091304.2-201ENST00000564639 760 ntBASIC15.23■□□□□ 0.03
CPEB3Q8NE35 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 AC073592.5-201ENST00000624854 528 ntBASIC15.23■□□□□ 0.03
CPEB3Q8NE35 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CPEB3Q8NE35 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.22■□□□□ 0.03
CPEB3Q8NE35 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AC108860.2-201ENST00000562760 2183 ntBASIC15.21■□□□□ 0.03
CPEB3Q8NE35 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AP001269.4-201ENST00000609611 512 ntBASIC15.21■□□□□ 0.03
CPEB3Q8NE35 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AC046185.3-201ENST00000623228 1824 ntBASIC15.21■□□□□ 0.03
CPEB3Q8NE35 OR6D1P-203ENST00000641209 4860 ntBASIC15.21■□□□□ 0.03
CPEB3Q8NE35 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CPEB3Q8NE35 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPEB3Q8NE35 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CPEB3Q8NE35 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.21■□□□□ 0.02
CPEB3Q8NE35 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPEB3Q8NE35 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPEB3Q8NE35 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CPEB3Q8NE35 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPEB3Q8NE35 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms