Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 TERC-201ENST00000602385 541 ntBASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 AC116407.3-201ENST00000623905 1129 ntBASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 AC010460.3-201ENST00000511359 1579 ntBASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 LINC00304-203ENST00000565008 1864 ntBASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 AC011467.2-201ENST00000598425 242 ntBASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
CCDC33Q8N5R6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AP005117.1-201ENST00000584346 1413 ntBASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 SART3-203ENST00000546611 1184 ntBASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC021087.4-201ENST00000563761 564 ntBASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC116407.2-201ENST00000613639 860 ntBASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCDC33Q8N5R6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 OR6D1P-202ENST00000641007 5290 ntBASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 AL645608.8-201ENST00000606034 2086 ntBASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCDC33Q8N5R6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms